STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SRA_00563COG0765 ABC-type amino acid transport system, permease component. (267 aa)    
Predicted Functional Partners:
SRA_00568
Phosphate ABC transporter ATP-binding protein; COG1126 ABC-type polar amino acid transport system, ATPase component.
 0.997
SRA_04026
Putative amino acid transporter, amino acid-binding protein; COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain.
 
 0.960
SRA_00558
Putative ABC transporter, amino acid binding protein; COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain.
 
 0.920
SRA_04016
Putative amino acid transporter, amino acid-binding protein; COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain.
 
 0.905
SRA_04636
Putative amino acid ABC transporter, ATP-binding protein; COG1126 ABC-type polar amino acid transport system, ATPase component.
 
 0.880
SRA_03981
Glutamine transport ATP-binding protein GlnQ; COG1126 ABC-type polar amino acid transport system, ATPase component.
 
 0.862
SRA_07616
Glutamine transport ATP-binding protein GlnQ; COG1126 ABC-type polar amino acid transport system, ATPase component.
 
 0.861
SRA_06756
Putative amino acid ABC transporter, ATP-binding protein; COG1126 ABC-type polar amino acid transport system, ATPase component.
 
 0.852
SRA_09853
Phosphate ABC transporter ATP-binding protein; COG1126 ABC-type polar amino acid transport system, ATPase component.
 
 0.850
SRA_01322
Putative amino acid binding protein; COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain.
   0.843
Your Current Organism:
Streptococcus ratti
NCBI taxonomy Id: 699248
Other names: S. ratti FA-1 = DSM 20564, Streptococcus ratti DSM 20564, Streptococcus ratti DSM 20564 = FA-1, Streptococcus ratti FA-1, Streptococcus ratti FA-1 = DSM 20564
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.