STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SRA_01597COG0744 Membrane carboxypeptidase (penicillin-binding protein). (789 aa)    
Predicted Functional Partners:
SRA_00538
COG0768 Cell division protein FtsI/penicillin-binding protein 2.
 
 
 0.960
SRA_07486
COG0768 Cell division protein FtsI/penicillin-binding protein 2.
 
 
 0.948
SRA_00603
Penicillin-binding protein 1a; Membrane carboxypeptidase; COG0744 Membrane carboxypeptidase (penicillin-binding protein).
  
  
0.928
SRA_01417
COG0744 Membrane carboxypeptidase (penicillin-binding protein).
  
  
0.926
SRA_09698
COG1686 D-alanyl-D-alanine carboxypeptidase; Belongs to the peptidase S11 family.
  
 
 0.912
SRA_07431
Putative 40K cell wall protein precursor.
     
  0.900
SRA_01087
COG1286 Uncharacterized membrane protein, required for colicin V production.
 
     0.773
SRA_07656
COG3599 Cell division initiation protein.
 
 
 
 0.636
mltG
Putative aminodeoxychorismate lyase; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation. Belongs to the transglycosylase MltG family.
 
   
 0.607
gpsB
Hypothetical protein; Divisome component that associates with the complex late in its assembly, after the Z-ring is formed, and is dependent on DivIC and PBP2B for its recruitment to the divisome. Together with EzrA, is a key component of the system that regulates PBP1 localization during cell cycle progression. Its main role could be the removal of PBP1 from the cell pole after pole maturation is completed. Also contributes to the recruitment of PBP1 to the division complex. Not essential for septum formation.
   
 
 0.601
Your Current Organism:
Streptococcus ratti
NCBI taxonomy Id: 699248
Other names: S. ratti FA-1 = DSM 20564, Streptococcus ratti DSM 20564, Streptococcus ratti DSM 20564 = FA-1, Streptococcus ratti FA-1, Streptococcus ratti FA-1 = DSM 20564
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