Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
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SRA_02406COG0559 Branched-chain amino acid ABC-type transport system, permease components; Belongs to the binding-protein-dependent transport system permease family. (289 aa)    
Predicted Functional Partners:
SRA_02401
COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component.
 
 
 0.999
SRA_02411
COG4177 ABC-type branched-chain amino acid transport system, permease component; Belongs to the binding-protein-dependent transport system permease family.
 
0.999
SRA_02416
COG0411 ABC-type branched-chain amino acid transport systems, ATPase component.
 
 
 0.999
SRA_02421
Leucine/isoleucine/valine transporter ATP-binding subunit; COG0410 ABC-type branched-chain amino acid transport systems, ATPase component.
 
 
 0.999
SRA_02426
Hypothetical protein.
       0.773
SRA_02431
Putative acetoin utilization protein, acetoin dehydrogenase; COG0517 FOG: CBS domain.
 
    0.752
tmk
Thymidylate kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family.
       0.661
SRA_04886
COG1176 ABC-type spermidine/putrescine transport system, permease component I.
   
  
 0.658
potA
Spermidine/putrescine import ATP-binding protein potA; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Spermidine/putrescine importer (TC 3.A.1.11.1) family.
      
 0.657
SRA_04891
COG1177 ABC-type spermidine/putrescine transport system, permease component II.
      
 0.657
Your Current Organism:
Streptococcus ratti
NCBI taxonomy Id: 699248
Other names: S. ratti FA-1 = DSM 20564, Streptococcus ratti DSM 20564, Streptococcus ratti DSM 20564 = FA-1, Streptococcus ratti FA-1, Streptococcus ratti FA-1 = DSM 20564
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