STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SRA_02431Putative acetoin utilization protein, acetoin dehydrogenase; COG0517 FOG: CBS domain. (219 aa)    
Predicted Functional Partners:
SRA_02411
COG4177 ABC-type branched-chain amino acid transport system, permease component; Belongs to the binding-protein-dependent transport system permease family.
 
    0.778
SRA_02416
COG0411 ABC-type branched-chain amino acid transport systems, ATPase component.
 
    0.769
SRA_02406
COG0559 Branched-chain amino acid ABC-type transport system, permease components; Belongs to the binding-protein-dependent transport system permease family.
 
    0.767
SRA_02421
Leucine/isoleucine/valine transporter ATP-binding subunit; COG0410 ABC-type branched-chain amino acid transport systems, ATPase component.
 
    0.764
SRA_02401
COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component.
 
     0.709
SRA_02446
Putative signal peptidase II; COG1774 Uncharacterized homolog of PSP1.
 
     0.632
rsmI
Hypothetical protein; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA.
   
   0.626
tmk
Thymidylate kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family.
       0.602
SRA_02426
Hypothetical protein.
       0.586
SRA_02441
DNA polymerase III subunit delta; COG0470 ATPase involved in DNA replication.
       0.584
Your Current Organism:
Streptococcus ratti
NCBI taxonomy Id: 699248
Other names: S. ratti FA-1 = DSM 20564, Streptococcus ratti DSM 20564, Streptococcus ratti DSM 20564 = FA-1, Streptococcus ratti FA-1, Streptococcus ratti FA-1 = DSM 20564
Server load: low (38%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.