STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SRA_02771Cellobiose transcriptional regulator/enzyme IIA; COG3711 Transcriptional antiterminator. (662 aa)    
Predicted Functional Partners:
celC
COG1447 Phosphotransferase system cellobiose-specific component IIA.
 
  
 0.940
celB
COG1440 Phosphotransferase system cellobiose-specific component IIB.
 
  
 0.900
SRA_05721
COG2213 Phosphotransferase system, mannitol-specific IIBC component.
 
  
 0.778
SRA_06561
PTS system, lactose-specific enzyme IIBC EIIBC-LAC; COG1455 Phosphotransferase system cellobiose-specific component IIC.
 
  
 0.763
celD
Cellobiose phosphotransferase system IIC component; The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane.
 
  
 0.755
SRA_06566
PTS system, lactose-specific enzyme IIA EIIA-LAC; COG1447 Phosphotransferase system cellobiose-specific component IIA.
 
  
 0.735
TreB
Putative PTS system, trehalose-specific IIABC component; COG1264 Phosphotransferase system IIB components.
 
 
 0.726
SRA_05711
PTS system, mannitol-specific enzyme IIA; COG4668 Mannitol/fructose-specific phosphotransferase system, IIA domain.
 
  
 0.722
mtlD
COG0246 Mannitol-1-phosphate/altronate dehydrogenases.
 
  
 0.681
SRA_00972
Putative PTS system, sucrose-specific IIABC component; COG1264 Phosphotransferase system IIB components.
  
 
 0.675
Your Current Organism:
Streptococcus ratti
NCBI taxonomy Id: 699248
Other names: S. ratti FA-1 = DSM 20564, Streptococcus ratti DSM 20564, Streptococcus ratti DSM 20564 = FA-1, Streptococcus ratti FA-1, Streptococcus ratti FA-1 = DSM 20564
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.