STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SRA_02901COG3689 Predicted membrane protein. (271 aa)    
Predicted Functional Partners:
SRA_02906
COG0701 Predicted permeases.
 
  
 0.965
SRA_02911
Hypothetical protein.
       0.773
SRA_04451
COG4835 Uncharacterized protein conserved in bacteria.
  
     0.596
SRA_07826
Hypothetical protein; COG1522 Transcriptional regulators.
  
     0.576
SRA_02916
Luciferase family protein; COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases.
       0.570
SRA_09606
Hypothetical protein; COG2919 Septum formation initiator.
  
     0.557
SRA_09416
COG4466 Uncharacterized protein conserved in bacteria.
  
     0.555
SRA_02896
Putative drug-export protein; Multidrug resistance protein; COG0477 Permeases of the major facilitator superfamily.
       0.527
SRA_03701
Hypothetical protein.
  
     0.502
SRA_09616
COG2367 Beta-lactamase class A.
  
     0.459
Your Current Organism:
Streptococcus ratti
NCBI taxonomy Id: 699248
Other names: S. ratti FA-1 = DSM 20564, Streptococcus ratti DSM 20564, Streptococcus ratti DSM 20564 = FA-1, Streptococcus ratti FA-1, Streptococcus ratti FA-1 = DSM 20564
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.