STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SRA_03001COG3091 Uncharacterized protein conserved in bacteria; Belongs to the SprT family. (147 aa)    
Predicted Functional Partners:
SRA_02996
COG2183 Transcriptional accessory protein.
  
  
 0.823
SRA_00203
COG3480 Predicted secreted protein containing a PDZ domain.
 
     0.688
YabA
DNA replication initiation control protein YabA; Involved in initiation control of chromosome replication. Belongs to the YabA family.
  
     0.672
SRA_03006
Hypothetical protein; COG1983 Putative stress-responsive transcriptional regulator.
       0.599
YqeH
GTP-binding protein YqeH; COG1161 Predicted GTPases.
  
     0.553
SRA_06456
DNA replication protein DnaD; COG3935 Putative primosome component and related proteins.
 
     0.518
SRA_00613
COG4474 Uncharacterized protein conserved in bacteria; Belongs to the UPF0398 family.
  
     0.507
SRA_00213
COG4470 Uncharacterized protein conserved in bacteria.
  
     0.475
hprK
HPr kinase/phosphorylase; Catalyzes the ATP- as well as the pyrophosphate-dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK/P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P-Ser-HPr). The two antagonistic activities of HprK/P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon [...]
 
     0.470
SRA_00383
COG4473 Predicted ABC-type exoprotein transport system, permease component.
  
     0.462
Your Current Organism:
Streptococcus ratti
NCBI taxonomy Id: 699248
Other names: S. ratti FA-1 = DSM 20564, Streptococcus ratti DSM 20564, Streptococcus ratti DSM 20564 = FA-1, Streptococcus ratti FA-1, Streptococcus ratti FA-1 = DSM 20564
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.