STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SRA_03181Putative peptidoglycan branched peptide synthesis protein; Alanine adding enzyme; beta-lactam resistance factor MurN; COG2348 Uncharacterized protein involved in methicillin resistance. (411 aa)    
Predicted Functional Partners:
SRA_03186
Putative peptidoglycan branched peptide synthesis protein MurM; COG2348 Uncharacterized protein involved in methicillin resistance.
 
  
0.987
SRA_03191
Hypothetical protein; COG0561 Predicted hydrolases of the HAD superfamily.
     
 0.802
SRA_05201
Hypothetical protein; COG3942 Surface antigen.
  
   
 0.638
SRA_09416
COG4466 Uncharacterized protein conserved in bacteria.
  
     0.568
SRA_03196
Hypothetical protein; COG1078 HD superfamily phosphohydrolases.
       0.528
SRA_03201
Na+/solute symporter.
 
     0.503
SRA_01617
COG1846 Transcriptional regulators.
  
     0.469
SRA_07826
Hypothetical protein; COG1522 Transcriptional regulators.
  
     0.469
SRA_07921
Hypothetical protein; COG1388 FOG: LysM repeat.
 
   
 0.407
SRA_08011
COG4129 Predicted membrane protein.
  
     0.404
Your Current Organism:
Streptococcus ratti
NCBI taxonomy Id: 699248
Other names: S. ratti FA-1 = DSM 20564, Streptococcus ratti DSM 20564, Streptococcus ratti DSM 20564 = FA-1, Streptococcus ratti FA-1, Streptococcus ratti FA-1 = DSM 20564
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