STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SRA_03636COG3711 Transcriptional antiterminator. (639 aa)    
Predicted Functional Partners:
SRA_04426
Putative PTS system, fructose-specific enzyme IIABC component; COG1762 Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type).
  
  
 0.985
SRA_06091
Putative PTS system, fructose-specific IIBC component; COG1445 Phosphotransferase system fructose-specific component IIB.
  
  
 0.968
SRA_05721
COG2213 Phosphotransferase system, mannitol-specific IIBC component.
 
  
 0.915
mtlD
COG0246 Mannitol-1-phosphate/altronate dehydrogenases.
 
  
 0.875
SRA_08516
COG3711 Transcriptional antiterminator.
 
  
 0.778
celC
COG1447 Phosphotransferase system cellobiose-specific component IIA.
 
  
 0.767
SRA_03646
COG1445 Phosphotransferase system fructose-specific component IIB.
 
  
 0.766
SRA_03651
Putative PTS enzyme-II fructose; COG1299 Phosphotransferase system, fructose-specific IIC component.
 
  
 0.733
SRA_06561
PTS system, lactose-specific enzyme IIBC EIIBC-LAC; COG1455 Phosphotransferase system cellobiose-specific component IIC.
 
  
 0.721
SRA_06566
PTS system, lactose-specific enzyme IIA EIIA-LAC; COG1447 Phosphotransferase system cellobiose-specific component IIA.
 
  
 0.721
Your Current Organism:
Streptococcus ratti
NCBI taxonomy Id: 699248
Other names: S. ratti FA-1 = DSM 20564, Streptococcus ratti DSM 20564, Streptococcus ratti DSM 20564 = FA-1, Streptococcus ratti FA-1, Streptococcus ratti FA-1 = DSM 20564
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.