STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SRA_04381ABC transporter, permease protein, putative; COG0577 ABC-type antimicrobial peptide transport system, permease component. (412 aa)    
Predicted Functional Partners:
SRA_04376
ABC transporter ATP-binding protein; COG1136 ABC-type antimicrobial peptide transport system, ATPase component.
 
 0.998
SRA_04371
Putative permease; COG0845 Membrane-fusion protein.
 
 
 0.994
SRA_05121
Putative ABC transporter, ATP-binding protein; COG1136 ABC-type antimicrobial peptide transport system, ATPase component.
 
 0.957
SRA_05626
Putative ABC transporter, ATP-binding protein; COG1136 ABC-type antimicrobial peptide transport system, ATPase component.
 
 0.945
SRA_05311
Putative ABC transporter, ATP-binding protein; COG1136 ABC-type antimicrobial peptide transport system, ATPase component.
 
 0.920
ftsE
Putative ABC transporter, ATP-binding component; Part of the ABC transporter FtsEX involved in cellular division.
   
 0.845
SRA_05691
Putative amino acid ABC transporter, ATP-binding protein; COG1126 ABC-type polar amino acid transport system, ATPase component.
 
     0.816
SRA_06201
Putative ABC transporter, membrane protein subunit and ATP-binding protein; COG1136 ABC-type antimicrobial peptide transport system, ATPase component.
 
 
0.785
SRA_07616
Glutamine transport ATP-binding protein GlnQ; COG1126 ABC-type polar amino acid transport system, ATPase component.
 
      0.781
SRA_06756
Putative amino acid ABC transporter, ATP-binding protein; COG1126 ABC-type polar amino acid transport system, ATPase component.
 
      0.750
Your Current Organism:
Streptococcus ratti
NCBI taxonomy Id: 699248
Other names: S. ratti FA-1 = DSM 20564, Streptococcus ratti DSM 20564, Streptococcus ratti DSM 20564 = FA-1, Streptococcus ratti FA-1, Streptococcus ratti FA-1 = DSM 20564
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.