STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SRA_04626COG0765 ABC-type amino acid transport system, permease component. (231 aa)    
Predicted Functional Partners:
SRA_04636
Putative amino acid ABC transporter, ATP-binding protein; COG1126 ABC-type polar amino acid transport system, ATPase component.
 
 0.996
SRA_04621
COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain.
 
  0.991
SRA_04631
COG0765 ABC-type amino acid transport system, permease component.
 
  
 
0.983
SRA_04641
Putative amino acid binding protein; COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain.
 
 0.874
SRA_03981
Glutamine transport ATP-binding protein GlnQ; COG1126 ABC-type polar amino acid transport system, ATPase component.
 
 
 0.862
SRA_07616
Glutamine transport ATP-binding protein GlnQ; COG1126 ABC-type polar amino acid transport system, ATPase component.
 
 
 0.861
SRA_00568
Phosphate ABC transporter ATP-binding protein; COG1126 ABC-type polar amino acid transport system, ATPase component.
 
 
 0.860
SRA_06756
Putative amino acid ABC transporter, ATP-binding protein; COG1126 ABC-type polar amino acid transport system, ATPase component.
 
 
 0.857
SRA_09853
Phosphate ABC transporter ATP-binding protein; COG1126 ABC-type polar amino acid transport system, ATPase component.
 
 
 0.857
SRA_04616
Hypothetical protein; COG0407 Uroporphyrinogen-III decarboxylase; Belongs to the uroporphyrinogen decarboxylase family.
 
   0.827
Your Current Organism:
Streptococcus ratti
NCBI taxonomy Id: 699248
Other names: S. ratti FA-1 = DSM 20564, Streptococcus ratti DSM 20564, Streptococcus ratti DSM 20564 = FA-1, Streptococcus ratti FA-1, Streptococcus ratti FA-1 = DSM 20564
Server load: low (38%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.