STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SRA_04661COG0435 Predicted glutathione S-transferase; overlaps another CDS with the same product name. (345 aa)    
Predicted Functional Partners:
SRA_04641
Putative amino acid binding protein; COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain.
 
     0.800
SRA_04656
COG0435 Predicted glutathione S-transferase; overlaps another CDS with the same product name.
 
    
0.799
SRA_04646
Hypothetical protein; COG0454 Histone acetyltransferase HPA2 and related acetyltransferases.
       0.779
SRA_04651
Hypothetical protein.
       0.773
fni
Isopentenyl pyrophosphate isomerase; Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP).
  
    0.513
MvaD
COG3407 Mevalonate pyrophosphate decarboxylase.
       0.504
SRA_04671
COG1577 Mevalonate kinase.
       0.504
SRA_04636
Putative amino acid ABC transporter, ATP-binding protein; COG1126 ABC-type polar amino acid transport system, ATPase component.
       0.469
SRA_04631
COG0765 ABC-type amino acid transport system, permease component.
       0.464
SRA_04626
COG0765 ABC-type amino acid transport system, permease component.
       0.461
Your Current Organism:
Streptococcus ratti
NCBI taxonomy Id: 699248
Other names: S. ratti FA-1 = DSM 20564, Streptococcus ratti DSM 20564, Streptococcus ratti DSM 20564 = FA-1, Streptococcus ratti FA-1, Streptococcus ratti FA-1 = DSM 20564
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.