STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SRA_04901COG3711 Transcriptional antiterminator. (278 aa)    
Predicted Functional Partners:
SRA_04906
Putative PTS system, beta-glucoside-specific EII component; COG1264 Phosphotransferase system IIB components.
 
 0.921
SRA_07871
PTS system, beta-glucoside-specific IIABC component; COG1264 Phosphotransferase system IIB components.
 
 0.897
SRA_10078
PTS system, beta-glucoside-specific IIABC component; COG1264 Phosphotransferase system IIB components.
 
 0.872
TreB
Putative PTS system, trehalose-specific IIABC component; COG1264 Phosphotransferase system IIB components.
 
 
 0.810
SRA_00972
Putative PTS system, sucrose-specific IIABC component; COG1264 Phosphotransferase system IIB components.
 
 0.803
SRA_08876
Putative PTS system, glucose-specific IIABC component; COG1263 Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific.
 
 
 0.677
SRA_04896
COG0687 Spermidine/putrescine-binding periplasmic protein.
  
    0.538
SRA_04891
COG1177 ABC-type spermidine/putrescine transport system, permease component II.
       0.516
potA
Spermidine/putrescine import ATP-binding protein potA; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Spermidine/putrescine importer (TC 3.A.1.11.1) family.
       0.503
SRA_04886
COG1176 ABC-type spermidine/putrescine transport system, permease component I.
       0.503
Your Current Organism:
Streptococcus ratti
NCBI taxonomy Id: 699248
Other names: S. ratti FA-1 = DSM 20564, Streptococcus ratti DSM 20564, Streptococcus ratti DSM 20564 = FA-1, Streptococcus ratti FA-1, Streptococcus ratti FA-1 = DSM 20564
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.