STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SRA_05201Hypothetical protein; COG3942 Surface antigen. (153 aa)    
Predicted Functional Partners:
SRA_07921
Hypothetical protein; COG1388 FOG: LysM repeat.
 
  
 0.841
SRA_04116
Hypothetical protein; COG3942 Surface antigen.
 
  
 0.754
SRA_02004
Putative secreted antigen GbpB/SagA; Putative peptidoglycan hydrolase; COG3883 Uncharacterized protein conserved in bacteria.
 
  
 0.667
SRA_03181
Putative peptidoglycan branched peptide synthesis protein; Alanine adding enzyme; beta-lactam resistance factor MurN; COG2348 Uncharacterized protein involved in methicillin resistance.
  
   
 0.638
SRA_05206
Putative transcriptional regulator; COG2207 AraC-type DNA-binding domain-containing proteins.
     
 0.502
SRA_06706
Bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; COG0737 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases.
  
 
 0.461
PknB
COG0515 Serine/threonine protein kinase.
  
  
 0.460
SRA_03721
Hypothetical protein; COG3757 Lyzozyme M1 (1,4-beta-N-acetylmuramidase).
  
  
 0.459
SRA_03141
Putative endolysin; COG3757 Lyzozyme M1 (1,4-beta-N-acetylmuramidase).
 
   
 0.455
SRA_03186
Putative peptidoglycan branched peptide synthesis protein MurM; COG2348 Uncharacterized protein involved in methicillin resistance.
  
   
 0.437
Your Current Organism:
Streptococcus ratti
NCBI taxonomy Id: 699248
Other names: S. ratti FA-1 = DSM 20564, Streptococcus ratti DSM 20564, Streptococcus ratti DSM 20564 = FA-1, Streptococcus ratti FA-1, Streptococcus ratti FA-1 = DSM 20564
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.