STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SRA_05701Putative alkylphosphonate uptake protein; COG2824 Uncharacterized Zn-ribbon-containing protein involved in phosphonate metabolism. (110 aa)    
Predicted Functional Partners:
mtlD
COG0246 Mannitol-1-phosphate/altronate dehydrogenases.
     
 0.588
SRA_05721
COG2213 Phosphotransferase system, mannitol-specific IIBC component.
     
 0.545
SRA_05711
PTS system, mannitol-specific enzyme IIA; COG4668 Mannitol/fructose-specific phosphotransferase system, IIA domain.
       0.530
SRA_05716
Putative transcriptional regulator MtlR; COG3711 Transcriptional antiterminator.
       0.529
SRA_05696
COG0765 ABC-type amino acid transport system, permease component.
       0.500
SRA_05691
Putative amino acid ABC transporter, ATP-binding protein; COG1126 ABC-type polar amino acid transport system, ATPase component.
       0.452
SRA_05686
Putative ABC transporter, glutamine binding protein; COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain.
     
 0.429
Your Current Organism:
Streptococcus ratti
NCBI taxonomy Id: 699248
Other names: S. ratti FA-1 = DSM 20564, Streptococcus ratti DSM 20564, Streptococcus ratti DSM 20564 = FA-1, Streptococcus ratti FA-1, Streptococcus ratti FA-1 = DSM 20564
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.