STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SRA_06091Putative PTS system, fructose-specific IIBC component; COG1445 Phosphotransferase system fructose-specific component IIB. (465 aa)    
Predicted Functional Partners:
PfkB-2
COG1105 Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB); Belongs to the carbohydrate kinase PfkB family. LacC subfamily.
 
 
 0.998
PfkB
COG1105 Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB); Belongs to the carbohydrate kinase PfkB family. LacC subfamily.
 
 
 0.991
SRA_06086
Putative PTS system, fructose-specific IIA component; COG1762 Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type).
  
 0.985
SRA_03636
COG3711 Transcriptional antiterminator.
  
  
 0.968
lacC
COG1105 Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB); Belongs to the carbohydrate kinase PfkB family. LacC subfamily.
 
  
 0.968
SRA_07116
Phosphocarrier protein HPr; COG1925 Phosphotransferase system, HPr-related proteins.
  
 
 0.968
SRA_10108
Putative transcriptional regulator; COG3711 Transcriptional antiterminator.
  
  
 0.968
SRA_03641
PTS system, fructose-specific IIA component; COG1762 Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type).
  
 0.920
SRA_00967
Fructokinase; COG1940 Transcriptional regulator/sugar kinase.
    
 0.915
SRA_08601
L-iditol 2-dehydrogenase; COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases.
   
 
  0.904
Your Current Organism:
Streptococcus ratti
NCBI taxonomy Id: 699248
Other names: S. ratti FA-1 = DSM 20564, Streptococcus ratti DSM 20564, Streptococcus ratti DSM 20564 = FA-1, Streptococcus ratti FA-1, Streptococcus ratti FA-1 = DSM 20564
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