STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SRA_06296Putative endoglucanase precursor; COG3405 Endoglucanase Y; Belongs to the glycosyl hydrolase 8 (cellulase D) family. (369 aa)    
Predicted Functional Partners:
SRA_06301
COG1215 Glycosyltransferases, probably involved in cell wall biogenesis.
 
  
 0.963
SRA_06311
Hypothetical protein.
 
     0.888
SRA_04191
Cell surface protein precursor.
  
     0.631
SRA_06316
COG0381 UDP-N-acetylglucosamine 2-epimerase; Belongs to the UDP-N-acetylglucosamine 2-epimerase family.
  
    0.568
SRA_06291
COG0488 ATPase components of ABC transporters with duplicated ATPase domains.
       0.509
SRA_06321
COG5549 Predicted Zn-dependent protease.
 
     0.470
SRA_03406
COG4420 Predicted membrane protein.
  
     0.432
Your Current Organism:
Streptococcus ratti
NCBI taxonomy Id: 699248
Other names: S. ratti FA-1 = DSM 20564, Streptococcus ratti DSM 20564, Streptococcus ratti DSM 20564 = FA-1, Streptococcus ratti FA-1, Streptococcus ratti FA-1 = DSM 20564
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.