STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SRA_06321COG5549 Predicted Zn-dependent protease. (232 aa)    
Predicted Functional Partners:
SRA_05211
COG4814 Uncharacterized protein with an alpha/beta hydrolase fold.
  
     0.687
SRA_06311
Hypothetical protein.
 
     0.605
gtfB
Hypothetical protein; Required for polymorphic O-glycosylation of the serine-rich repeat protein in this bacteria. A stabilizing protein that is part of the accessory SecA2/SecY2 system specifically required to export serine-rich repeat cell wall proteins usually encoded upstream in the same operon. The GtfA-GtfB complex adds GlcNAc from UDP-GlcNAc to the substrate protein, attaching the first sugar residue. Stabilizes the glycosylation activity of GtfA. Has no N-acetylglucosaminyl transferase activity on its own.
  
     0.565
SRA_06781
Putative membrane nuclease EndA.
 
     0.545
SRA_06326
COG4808 Uncharacterized protein conserved in bacteria.
 
     0.534
DltD
Putative extramembranal protein, DltD protein; COG3966 Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein).
  
     0.525
SRA_08686
Levansucrase precursor; beta-D-fructosyltransferase; Belongs to the glycosyl hydrolase 68 family.
  
     0.515
SRA_04601
COG0642 Signal transduction histidine kinase.
  
     0.485
SRA_04151
Hypothetical protein; COG0438 Glycosyltransferase.
  
     0.483
SRA_06296
Putative endoglucanase precursor; COG3405 Endoglucanase Y; Belongs to the glycosyl hydrolase 8 (cellulase D) family.
 
     0.470
Your Current Organism:
Streptococcus ratti
NCBI taxonomy Id: 699248
Other names: S. ratti FA-1 = DSM 20564, Streptococcus ratti DSM 20564, Streptococcus ratti DSM 20564 = FA-1, Streptococcus ratti FA-1, Streptococcus ratti FA-1 = DSM 20564
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