STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SRA_06706Bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; COG0737 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases. (856 aa)    
Predicted Functional Partners:
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COG1816 Adenosine deaminase; Belongs to the metallo-dependent hydrolases superfamily. Adenosine and AMP deaminases family. Adenosine deaminase subfamily.
  
 
  0.919
deoD
COG0813 Purine-nucleoside phosphorylase.
  
 
  0.914
SRA_05441
Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family.
     
 0.900
SRA_05451
COG0213 Thymidine phosphorylase.
     
  0.900
SRA_05976
Purine nucleoside phosphorylase; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate.
     
  0.900
udk
COG0572 Uridine kinase.
     
  0.900
SRA_09546
COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain.
   
 
 0.506
SRA_08871
Hypothetical protein; COG3568 Metal-dependent hydrolase.
   
  
 0.501
SRA_10008
exo-beta-D-fructosidase; fructanase, FruA; COG1621 Beta-fructosidases (levanase/invertase).
  
 
 0.462
SRA_05201
Hypothetical protein; COG3942 Surface antigen.
  
 
 0.461
Your Current Organism:
Streptococcus ratti
NCBI taxonomy Id: 699248
Other names: S. ratti FA-1 = DSM 20564, Streptococcus ratti DSM 20564, Streptococcus ratti DSM 20564 = FA-1, Streptococcus ratti FA-1, Streptococcus ratti FA-1 = DSM 20564
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