STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SRA_06741Hypothetical protein; COG1235 Metal-dependent hydrolases of the beta-lactamase superfamily I. (267 aa)    
Predicted Functional Partners:
SRA_06751
VicR-like protein; COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain.
  
  
 0.887
VicK
Putative histidine kinase CovS; VicK-like protein; COG5002 Signal transduction histidine kinase.
 
  
 0.856
SRA_06736
Hypothetical protein.
       0.709
SRA_06756
Putative amino acid ABC transporter, ATP-binding protein; COG1126 ABC-type polar amino acid transport system, ATPase component.
  
    0.455
SRA_05111
COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain.
  
  
 0.452
SRA_03021
COG4768 Uncharacterized protein containing a divergent version of the methyl-accepting chemotaxis-like domain.
   
    0.420
SRA_06291
COG0488 ATPase components of ABC transporters with duplicated ATPase domains.
  
    0.412
SRA_06761
Putative ABC transporter, glutamine binding protein; COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain.
       0.409
Your Current Organism:
Streptococcus ratti
NCBI taxonomy Id: 699248
Other names: S. ratti FA-1 = DSM 20564, Streptococcus ratti DSM 20564, Streptococcus ratti DSM 20564 = FA-1, Streptococcus ratti FA-1, Streptococcus ratti FA-1 = DSM 20564
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.