STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SRA_07036Hypothetical protein. (188 aa)    
Predicted Functional Partners:
SRA_07031
Hypothetical protein; COG0500 SAM-dependent methyltransferases.
       0.800
SRA_01022
Hypothetical protein.
  
     0.606
SRA_07026
methylated-DNA--protein-cysteine methyltransferase; COG2169 Adenosine deaminase.
       0.566
SRA_07021
Peptidase E, putative; COG3340 Peptidase E; Belongs to the peptidase S51 family.
       0.528
SRA_07041
COG4781 Membrane domain of membrane-anchored glycerophosphoryl diester phosphodiesterase.
       0.474
SRA_07436
Hypothetical protein.
  
     0.450
SRA_03816
COG0640 Predicted transcriptional regulators.
  
     0.412
SRA_08261
Hypothetical protein; COG1335 Amidases related to nicotinamidase.
 
   
 0.400
Your Current Organism:
Streptococcus ratti
NCBI taxonomy Id: 699248
Other names: S. ratti FA-1 = DSM 20564, Streptococcus ratti DSM 20564, Streptococcus ratti DSM 20564 = FA-1, Streptococcus ratti FA-1, Streptococcus ratti FA-1 = DSM 20564
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.