STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SRA_07236Putative MutG. (248 aa)    
Predicted Functional Partners:
SRA_07241
Putative MutE.
 
   
 0.959
SRA_07246
Putative ABC transporter, ATP-binding protein MutF; COG1131 ABC-type multidrug transport system, ATPase component.
 
  
 0.952
SRA_07226
COG0642 Signal transduction histidine kinase.
 
     0.927
SRA_07231
COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain.
 
     0.834
SRA_08361
Membrane protein.
  
     0.538
SRA_01839
Hypothetical protein.
  
     0.491
SRA_05571
ABC transporter related protein; COG1131 ABC-type multidrug transport system, ATPase component.
 
  
 0.478
SRA_07436
Hypothetical protein.
  
     0.430
Your Current Organism:
Streptococcus ratti
NCBI taxonomy Id: 699248
Other names: S. ratti FA-1 = DSM 20564, Streptococcus ratti DSM 20564, Streptococcus ratti DSM 20564 = FA-1, Streptococcus ratti FA-1, Streptococcus ratti FA-1 = DSM 20564
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.