STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SRA_07536Hypothetical protein; COG2755 Lysophospholipase L1 and related esterases. (283 aa)    
Predicted Functional Partners:
SRA_07531
COG4698 Uncharacterized protein conserved in bacteria.
 
  
 0.971
SRA_07541
COG1307 Uncharacterized protein conserved in bacteria.
  
  
 0.810
argR
Putative arginine repressor; Regulates arginine biosynthesis genes.
 
     0.609
SRA_07526
DNA-binding protein HU; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions.
  
    0.600
prsA
Foldase protein PrsA; Plays a major role in protein secretion by helping the post- translocational extracellular folding of several secreted proteins.
 
     0.596
SRA_00203
COG3480 Predicted secreted protein containing a PDZ domain.
  
     0.576
SRA_03771
Integral membrane protein; COG1368 Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily.
 
     0.573
SRA_02661
COG4479 Uncharacterized protein conserved in bacteria; Belongs to the UPF0346 family.
 
  
 0.564
SRA_06386
TPR repeat-containing protein; COG0457 FOG: TPR repeat.
  
     0.556
SRA_07556
Putative hemolysin; COG1189 Predicted rRNA methylase.
  
    0.522
Your Current Organism:
Streptococcus ratti
NCBI taxonomy Id: 699248
Other names: S. ratti FA-1 = DSM 20564, Streptococcus ratti DSM 20564, Streptococcus ratti DSM 20564 = FA-1, Streptococcus ratti FA-1, Streptococcus ratti FA-1 = DSM 20564
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.