STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SRA_07866COG1349 Transcriptional regulators of sugar metabolism. (245 aa)    
Predicted Functional Partners:
RpiB
COG0698 Ribose 5-phosphate isomerase RpiB.
  
  
 0.733
SRA_07871
PTS system, beta-glucoside-specific IIABC component; COG1264 Phosphotransferase system IIB components.
  
  
 0.696
SRA_07876
AP endonuclease; COG4952 Predicted sugar isomerase.
 
  
 0.684
SRA_04426
Putative PTS system, fructose-specific enzyme IIABC component; COG1762 Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type).
  
  
 0.584
SRA_07861
COG0036 Pentose-5-phosphate-3-epimerase.
  
    0.582
PfkB
COG1105 Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB); Belongs to the carbohydrate kinase PfkB family. LacC subfamily.
 
  
 0.563
PfkB-2
COG1105 Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB); Belongs to the carbohydrate kinase PfkB family. LacC subfamily.
 
  
 0.533
lacC
COG1105 Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB); Belongs to the carbohydrate kinase PfkB family. LacC subfamily.
 
  
 0.512
lacA
Galactose-6-phosphate isomerase subunit LacA; COG0698 Ribose 5-phosphate isomerase RpiB.
  
  
 0.468
lacB
Galactose-6-phosphate isomerase subunit LacB; COG0698 Ribose 5-phosphate isomerase RpiB.
  
  
 0.420
Your Current Organism:
Streptococcus ratti
NCBI taxonomy Id: 699248
Other names: S. ratti FA-1 = DSM 20564, Streptococcus ratti DSM 20564, Streptococcus ratti DSM 20564 = FA-1, Streptococcus ratti FA-1, Streptococcus ratti FA-1 = DSM 20564
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.