STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SRA_07961COG0395 ABC-type sugar transport system, permease component. (277 aa)    
Predicted Functional Partners:
SRA_07966
COG1175 ABC-type sugar transport systems, permease components.
 
 0.998
SRA_07971
Sugar ABC transporter, sugar-binding protein; COG1653 ABC-type sugar transport system, periplasmic component.
 
 0.998
UgpC-2
Multiple sugar-binding ABC transporter, ATP-binding protein, MsmK; COG3839 ABC-type sugar transport systems, ATPase components; Belongs to the ABC transporter superfamily.
 
 0.993
UgpC
Putative ABC transporter, ATP-binding protein, MsmK-like protein; COG3839 ABC-type sugar transport systems, ATPase components; Belongs to the ABC transporter superfamily.
 
 0.990
SRA_06966
Putative maltose/maltodextrin ABC transporter, permease protein MalF; COG1175 ABC-type sugar transport systems, permease components.
 
 
 0.939
SRA_07976
COG3345 Alpha-galactosidase.
 
  
 0.867
SRA_01467
Putative sugar-binding periplasmic protein; COG1653 ABC-type sugar transport system, periplasmic component.
  
 
 0.829
GtfA
Sucrose phosphorylase, GtfA; COG0366 Glycosidases.
 
  
 0.826
SRA_07981
Putative MSM operon regulatory protein; COG2207 AraC-type DNA-binding domain-containing proteins.
 
  
 0.672
galT
COG4468 Galactose-1-phosphate uridyltransferase.
  
    0.593
Your Current Organism:
Streptococcus ratti
NCBI taxonomy Id: 699248
Other names: S. ratti FA-1 = DSM 20564, Streptococcus ratti DSM 20564, Streptococcus ratti DSM 20564 = FA-1, Streptococcus ratti FA-1, Streptococcus ratti FA-1 = DSM 20564
Server load: low (38%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.