STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ulaD3-keto-L-gulonate-6-phosphate decarboxylase; COG0269 3-hexulose-6-phosphate synthase and related proteins. (221 aa)    
Predicted Functional Partners:
SRA_08571
COG3623 Putative L-xylulose-5-phosphate 3-epimerase.
 
 
 0.996
UlaG
Putative L-ascorbate 6-phosphate lactonase; COG2220 Predicted Zn-dependent hydrolases of the beta-lactamase fold.
 
  
 0.981
araD
COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases.
 
  
 0.892
SRA_08581
COG1762 Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type).
 
  
 0.861
SRA_08586
PTS system lactose/cellobiose family IIB subunit; COG3414 Phosphotransferase system, galactitol-specific IIB component.
 
  
 0.861
SRA_08591
Ascorbate-specific PTS system enzyme IIC; COG3037 Uncharacterized protein conserved in bacteria.
 
   
 0.845
SRA_06966
Putative maltose/maltodextrin ABC transporter, permease protein MalF; COG1175 ABC-type sugar transport systems, permease components.
   
    0.443
SRA_08876
Putative PTS system, glucose-specific IIABC component; COG1263 Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific.
 
  
 0.417
SRA_08561
Hypothetical protein.
       0.414
Your Current Organism:
Streptococcus ratti
NCBI taxonomy Id: 699248
Other names: S. ratti FA-1 = DSM 20564, Streptococcus ratti DSM 20564, Streptococcus ratti DSM 20564 = FA-1, Streptococcus ratti FA-1, Streptococcus ratti FA-1 = DSM 20564
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.