STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SRA_08606Galactitol PTS, EIIC; COG3775 Phosphotransferase system, galactitol-specific IIC component. (422 aa)    
Predicted Functional Partners:
SRA_08616
Galacitol PTS, EIIA; COG1762 Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type).
 
 
 0.994
SRA_08611
COG3414 Phosphotransferase system, galactitol-specific IIB component.
 
 
 0.993
SRA_08601
L-iditol 2-dehydrogenase; COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases.
  
 0.924
SRA_07116
Phosphocarrier protein HPr; COG1925 Phosphotransferase system, HPr-related proteins.
    
 0.904
SRA_06586
PTS system, IIA component, putative; COG1762 Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type).
 
  
 0.844
SRA_08621
Hypothetical protein; COG3711 Transcriptional antiterminator.
 
  
 0.832
SRA_08336
Regulator of sorbitol operon; COG3711 Transcriptional antiterminator.
 
  
 0.577
SRA_10108
Putative transcriptional regulator; COG3711 Transcriptional antiterminator.
 
  
 0.517
SRA_00148
Transcriptional antiterminator and PTS system component IIA; COG3711 Transcriptional antiterminator.
 
  
 0.511
SRA_02771
Cellobiose transcriptional regulator/enzyme IIA; COG3711 Transcriptional antiterminator.
 
  
 0.508
Your Current Organism:
Streptococcus ratti
NCBI taxonomy Id: 699248
Other names: S. ratti FA-1 = DSM 20564, Streptococcus ratti DSM 20564, Streptococcus ratti DSM 20564 = FA-1, Streptococcus ratti FA-1, Streptococcus ratti FA-1 = DSM 20564
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.