STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TreRRepressor of the trehalose operon; COG2188 Transcriptional regulators. (237 aa)    
Predicted Functional Partners:
TreB
Putative PTS system, trehalose-specific IIABC component; COG1264 Phosphotransferase system IIB components.
 
  
 0.891
SRA_07871
PTS system, beta-glucoside-specific IIABC component; COG1264 Phosphotransferase system IIB components.
 
  
 0.691
SRA_10078
PTS system, beta-glucoside-specific IIABC component; COG1264 Phosphotransferase system IIB components.
 
  
 0.643
SRA_04906
Putative PTS system, beta-glucoside-specific EII component; COG1264 Phosphotransferase system IIB components.
 
  
 0.634
SRA_00972
Putative PTS system, sucrose-specific IIABC component; COG1264 Phosphotransferase system IIB components.
 
  
 0.633
TreC
Putative trehalose-6-phosphate hydrolase TreA; COG0366 Glycosidases.
 
  
 0.622
SRA_08876
Putative PTS system, glucose-specific IIABC component; COG1263 Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific.
 
  
 0.569
NagA
COG1820 N-acetylglucosamine-6-phosphate deacetylase.
  
  
 0.431
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
     
 0.427
SRA_00982
Sucrose operon repressor; COG1609 Transcriptional regulators.
  
   
 0.404
Your Current Organism:
Streptococcus ratti
NCBI taxonomy Id: 699248
Other names: S. ratti FA-1 = DSM 20564, Streptococcus ratti DSM 20564, Streptococcus ratti DSM 20564 = FA-1, Streptococcus ratti FA-1, Streptococcus ratti FA-1 = DSM 20564
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.