STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GalE-2COG1087 UDP-glucose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. (340 aa)    
Predicted Functional Partners:
galT
COG4468 Galactose-1-phosphate uridyltransferase.
  
 
 0.957
GalU
Glucose-1-phosphate uridylyltransferase; COG1210 UDP-glucose pyrophosphorylase.
 
  
 0.927
Glf
COG0562 UDP-galactopyranose mutase.
    
 0.912
GalE
COG1087 UDP-glucose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family.
  
  
 
0.909
SRA_08986
Putative stress response protein; Glycosyltransferase involved in cell wall biogenesis; COG0463 Glycosyltransferases involved in cell wall biogenesis.
  
  
 0.711
SRA_08981
Putative transmembrane protein; COG4485 Predicted membrane protein.
       0.691
galK
Galactokinase; Catalyzes the transfer of the gamma-phosphate of ATP to D- galactose to form alpha-D-galactose-1-phosphate (Gal-1-P). Belongs to the GHMP kinase family. GalK subfamily.
  
 
 0.660
SRA_07836
COG1085 Galactose-1-phosphate uridylyltransferase.
  
 
 0.651
SRA_08971
Putative transmembrane protein; COG4485 Predicted membrane protein.
       0.484
SRA_06491
Hypothetical protein.
  
  
 0.442
Your Current Organism:
Streptococcus ratti
NCBI taxonomy Id: 699248
Other names: S. ratti FA-1 = DSM 20564, Streptococcus ratti DSM 20564, Streptococcus ratti DSM 20564 = FA-1, Streptococcus ratti FA-1, Streptococcus ratti FA-1 = DSM 20564
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