STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SRA_09371Putative succinate semialdehyde dehydrogenase; COG1012 NAD-dependent aldehyde dehydrogenases; Belongs to the aldehyde dehydrogenase family. (457 aa)    
Predicted Functional Partners:
SRA_07101
Hypothetical protein; COG1866 Phosphoenolpyruvate carboxykinase (ATP).
 
 
 0.895
SRA_07136
COG0372 Citrate synthase; Belongs to the citrate synthase family.
  
 0.886
SRA_07131
COG0538 Isocitrate dehydrogenases.
  
 0.823
SRA_09376
Putative cation-transporting P-type ATPase PacL; COG0474 Cation transport ATPase.
  
 0.555
AdhE
Bifunctional acetaldehyde-CoA/alcohol dehydrogenase; COG1012 NAD-dependent aldehyde dehydrogenases; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
  
 
 0.533
GltB
COG0067 Glutamate synthase domain 1.
  
  
 0.486
SRA_02971
Oxidoreductase; COG0673 Predicted dehydrogenases and related proteins.
  
  
 0.462
SRA_07091
Putative oxidoreductase; COG0673 Predicted dehydrogenases and related proteins.
  
  
 0.462
SRA_10063
Putative oxidoreductase; Fumarate reductase; COG0431 Predicted flavoprotein.
  
 
 0.444
SRA_04436
Bifunctional homocysteine S-methyltransferase/5,10-methylenetetrahydrofolate reductase protein; COG0646 Methionine synthase I (cobalamin-dependent), methyltransferase domain.
  
 
 0.440
Your Current Organism:
Streptococcus ratti
NCBI taxonomy Id: 699248
Other names: S. ratti FA-1 = DSM 20564, Streptococcus ratti DSM 20564, Streptococcus ratti DSM 20564 = FA-1, Streptococcus ratti FA-1, Streptococcus ratti FA-1 = DSM 20564
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