STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SRA_09491Putative peptidase; COG0612 Predicted Zn-dependent peptidases. (430 aa)    
Predicted Functional Partners:
SRA_09496
Putative peptidase; COG0612 Predicted Zn-dependent peptidases.
 
  
 0.978
SRA_02956
Hypothetical protein; COG0702 Predicted nucleoside-diphosphate-sugar epimerases.
   
 
 0.639
SRA_03946
Hypothetical protein; COG0702 Predicted nucleoside-diphosphate-sugar epimerases.
   
 
 0.639
PgsA
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; COG0558 Phosphatidylglycerophosphate synthase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
     
 0.630
SRA_02516
Deoxyadenosine kinase protein; COG1428 Deoxynucleoside kinases.
   
 
 0.626
SRA_09486
COG1426 Uncharacterized protein conserved in bacteria.
       0.622
YaaA-2
Hypothetical protein.
  
    0.619
ecfT
Cobalt permease; Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.
       0.615
cbiO
Cobalt transporter ATP-binding subunit; COG1122 ABC-type cobalt transport system, ATPase component; overlaps another CDS with the same product name.
       0.615
cbiO-2
Cobalt transporter ATP-binding subunit; COG1122 ABC-type cobalt transport system, ATPase component; overlaps another CDS with the same product name.
       0.615
Your Current Organism:
Streptococcus ratti
NCBI taxonomy Id: 699248
Other names: S. ratti FA-1 = DSM 20564, Streptococcus ratti DSM 20564, Streptococcus ratti DSM 20564 = FA-1, Streptococcus ratti FA-1, Streptococcus ratti FA-1 = DSM 20564
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.