STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SRA_09678Putative oligopeptide ABC transporter, ATP-binding protein OppD; COG0444 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component; Belongs to the ABC transporter superfamily. (350 aa)    
Predicted Functional Partners:
SRA_09683
COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
 
 0.999
SRA_09688
Putative oligopeptide transport system, permease protein OppB; COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
 
 0.999
SRA_09673
Putative oligopeptide ABC transporter, ATP-binding protein OppF; COG4608 ABC-type oligopeptide transport system, ATPase component; Belongs to the ABC transporter superfamily.
 
 
0.996
SRA_09693
Putative oligopeptide ABC transporter, substrate-binding protein OppA; COG4166 ABC-type oligopeptide transport system, periplasmic component.
 
 
 0.994
SRA_09668
2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase; COG0800 2-keto-3-deoxy-6-phosphogluconate aldolase.
       0.773
SRA_01272
Putative cobalt ABC transporter, ATP-binding protein; COG1122 ABC-type cobalt transport system, ATPase component.
 
  
0.651
SRA_02416
COG0411 ABC-type branched-chain amino acid transport systems, ATPase component.
    
0.484
secG
Preprotein translocase subunit SecG; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family.
  
  
 0.414
Your Current Organism:
Streptococcus ratti
NCBI taxonomy Id: 699248
Other names: S. ratti FA-1 = DSM 20564, Streptococcus ratti DSM 20564, Streptococcus ratti DSM 20564 = FA-1, Streptococcus ratti FA-1, Streptococcus ratti FA-1 = DSM 20564
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.