STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SRA_09773COG4907 Predicted membrane protein. (630 aa)    
Predicted Functional Partners:
mecA
Adaptor protein; Enables the recognition and targeting of unfolded and aggregated proteins to the ClpC protease or to other proteins involved in proteolysis.
 
     0.670
uppP
Undecaprenyl pyrophosphate phosphatase; Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin; Belongs to the UppP family.
       0.663
SRA_05781
Hypothetical protein.
  
     0.508
SRA_00078
Putative DNA primase; COG1960 Acyl-CoA dehydrogenases.
   
    0.507
SRA_09753
Putative glycosyl transferase N-acetylglucosaminyltransferase, RgpG; COG0472 UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase.
       0.507
SRA_01047
Hypothetical protein.
  
     0.477
SufD
Putative ABC transporter, membrane protein; COG0719 ABC-type transport system involved in Fe-S cluster assembly, permease component.
 
     0.456
SRA_01427
COG4640 Predicted membrane protein.
  
     0.440
SRA_02876
Hypothetical protein.
  
     0.436
SufC
Putative ABC transporter, ATP-binding protein; COG0396 ABC-type transport system involved in Fe-S cluster assembly, ATPase component.
       0.419
Your Current Organism:
Streptococcus ratti
NCBI taxonomy Id: 699248
Other names: S. ratti FA-1 = DSM 20564, Streptococcus ratti DSM 20564, Streptococcus ratti DSM 20564 = FA-1, Streptococcus ratti FA-1, Streptococcus ratti FA-1 = DSM 20564
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.