STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SRA_09838Hypothetical protein. (237 aa)    
Predicted Functional Partners:
SRA_09843
Putative ABC transporter, ATP-binding protein; COG1131 ABC-type multidrug transport system, ATPase component.
 
  
 0.935
SRA_07221
ABC transporter ATP-binding protein; COG1131 ABC-type multidrug transport system, ATPase component.
 
  
 0.726
SRA_08261
Hypothetical protein; COG1335 Amidases related to nicotinamidase.
  
     0.532
SRA_04511
Hypothetical protein; COG3279 Response regulator of the LytR/AlgR family.
 
    0.459
SRA_01517
Hypothetical protein; COG1266 Predicted metal-dependent membrane protease.
  
    0.447
SRA_09833
Hypothetical protein.
       0.443
SRA_09818
Hypothetical protein.
       0.441
SRA_09823
Putative oxidoreductase; COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases).
  
  
 0.440
SRA_09828
Hypothetical protein; COG0500 SAM-dependent methyltransferases.
       0.429
SRA_08941
CAAX amino protease; COG1266 Predicted metal-dependent membrane protease.
  
    0.406
Your Current Organism:
Streptococcus ratti
NCBI taxonomy Id: 699248
Other names: S. ratti FA-1 = DSM 20564, Streptococcus ratti DSM 20564, Streptococcus ratti DSM 20564 = FA-1, Streptococcus ratti FA-1, Streptococcus ratti FA-1 = DSM 20564
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.