STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SRA_09848COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain. (517 aa)    
Predicted Functional Partners:
SRA_09853
Phosphate ABC transporter ATP-binding protein; COG1126 ABC-type polar amino acid transport system, ATPase component.
 0.995
SRA_07616
Glutamine transport ATP-binding protein GlnQ; COG1126 ABC-type polar amino acid transport system, ATPase component.
 
 0.849
SRA_03981
Glutamine transport ATP-binding protein GlnQ; COG1126 ABC-type polar amino acid transport system, ATPase component.
 
 0.838
SRA_06756
Putative amino acid ABC transporter, ATP-binding protein; COG1126 ABC-type polar amino acid transport system, ATPase component.
 
 0.821
SRA_00568
Phosphate ABC transporter ATP-binding protein; COG1126 ABC-type polar amino acid transport system, ATPase component.
 
 0.797
SRA_04636
Putative amino acid ABC transporter, ATP-binding protein; COG1126 ABC-type polar amino acid transport system, ATPase component.
 
 0.793
SRA_03986
Putative glutamine ABC transporter, permease protein; COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain.
 
0.725
SRA_05691
Putative amino acid ABC transporter, ATP-binding protein; COG1126 ABC-type polar amino acid transport system, ATPase component.
 
 0.671
SRA_04626
COG0765 ABC-type amino acid transport system, permease component.
 
0.608
SRA_00563
COG0765 ABC-type amino acid transport system, permease component.
 
0.595
Your Current Organism:
Streptococcus ratti
NCBI taxonomy Id: 699248
Other names: S. ratti FA-1 = DSM 20564, Streptococcus ratti DSM 20564, Streptococcus ratti DSM 20564 = FA-1, Streptococcus ratti FA-1, Streptococcus ratti FA-1 = DSM 20564
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.