STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SRA_10033COG3830 ACT domain-containing protein. (88 aa)    
Predicted Functional Partners:
SRA_10028
Hypothetical protein.
 
     0.944
SRA_10023
Phosphoglycerate mutase family protein; COG0406 Fructose-2,6-bisphosphatase.
     
 0.599
SRA_10013
Putative N-acetyl-muramidase; COG1705 Muramidase (flagellum-specific).
       0.598
SRA_10018
COG1876 D-alanyl-D-alanine carboxypeptidase.
       0.598
SRA_10038
COG1396 Predicted transcriptional regulators.
       0.478
SRA_07376
Putative competence protein; COG0658 Predicted membrane metal-binding protein.
     
 0.469
Your Current Organism:
Streptococcus ratti
NCBI taxonomy Id: 699248
Other names: S. ratti FA-1 = DSM 20564, Streptococcus ratti DSM 20564, Streptococcus ratti DSM 20564 = FA-1, Streptococcus ratti FA-1, Streptococcus ratti FA-1 = DSM 20564
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.