STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MngBCOG0383 Alpha-mannosidase. (891 aa)    
Predicted Functional Partners:
SRA_10093
COG1299 Phosphotransferase system, fructose-specific IIC component.
 
    0.678
SRA_10103
PTS system, IIA component; COG1762 Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type).
 
    0.635
SRA_10108
Putative transcriptional regulator; COG3711 Transcriptional antiterminator.
 
    0.619
SRA_10098
PTS system, fructose-specific, IIB subunnit; COG1445 Phosphotransferase system fructose-specific component IIB.
  
    0.562
SRA_02751
Truncated; COG1940 Transcriptional regulator/sugar kinase.
 
  
 0.549
SRA_00967
Fructokinase; COG1940 Transcriptional regulator/sugar kinase.
 
  
 0.454
cmk
COG0283 Cytidylate kinase.
  
    0.423
SRA_04906
Putative PTS system, beta-glucoside-specific EII component; COG1264 Phosphotransferase system IIB components.
  
    0.423
Your Current Organism:
Streptococcus ratti
NCBI taxonomy Id: 699248
Other names: S. ratti FA-1 = DSM 20564, Streptococcus ratti DSM 20564, Streptococcus ratti DSM 20564 = FA-1, Streptococcus ratti FA-1, Streptococcus ratti FA-1 = DSM 20564
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.