STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000404925_00605Unannotated protein. (240 aa)    
Predicted Functional Partners:
GCA_000404925_00603
Unannotated protein.
  
  
 0.982
GCA_000404925_00602
Unannotated protein.
  
  
 0.966
GCA_000404925_00599
Unannotated protein.
 
  
 0.883
GCA_000404925_00604
Unannotated protein.
       0.773
GCA_000404925_00856
Unannotated protein.
  
  
 0.684
GCA_000404925_00581
Unannotated protein.
 
     0.514
GCA_000404925_00425
Unannotated protein.
   
 
 0.482
GCA_000404925_01127
Unannotated protein.
   
 
 0.482
GCA_000404925_00185
Unannotated protein.
     
 0.474
GCA_000404925_00606
Unannotated protein.
       0.450
Your Current Organism:
Microgenomates bacterium SCGC AAA011L6
NCBI taxonomy Id: 699262
Other names: M. bacterium SCGC AAA011-L6, Microgenomates bacterium SCGC AAA011-L6, candidate division OP11 bacterium SCGC AAA011-L6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.