Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KPN32256.1 | KPN32257.1 | SY89_03024 | SY89_03025 | Hypothetical protein. | Hypothetical protein. | 0.976 |
KPN32256.1 | KPN32258.1 | SY89_03024 | SY89_03026 | Hypothetical protein. | Hypothetical protein. | 0.433 |
KPN32257.1 | KPN32256.1 | SY89_03025 | SY89_03024 | Hypothetical protein. | Hypothetical protein. | 0.976 |
KPN32257.1 | KPN32258.1 | SY89_03025 | SY89_03026 | Hypothetical protein. | Hypothetical protein. | 0.433 |
KPN32258.1 | KPN32256.1 | SY89_03026 | SY89_03024 | Hypothetical protein. | Hypothetical protein. | 0.433 |
KPN32258.1 | KPN32257.1 | SY89_03026 | SY89_03025 | Hypothetical protein. | Hypothetical protein. | 0.433 |
KPN32258.1 | KPN32259.1 | SY89_03026 | SY89_03027 | Hypothetical protein. | SNARE associated golgi protein. | 0.565 |
KPN32258.1 | aspC_5 | SY89_03026 | SY89_02194 | Hypothetical protein. | Aspartate aminotransferase. | 0.514 |
KPN32258.1 | hisD | SY89_03026 | SY89_02740 | Hypothetical protein. | Bifunctional histidinal dehydrogenase/ histidinol dehydrogenase; Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine. | 0.499 |
KPN32259.1 | KPN32258.1 | SY89_03027 | SY89_03026 | SNARE associated golgi protein. | Hypothetical protein. | 0.565 |
aspC_5 | KPN32258.1 | SY89_02194 | SY89_03026 | Aspartate aminotransferase. | Hypothetical protein. | 0.514 |
aspC_5 | hisD | SY89_02194 | SY89_02740 | Aspartate aminotransferase. | Bifunctional histidinal dehydrogenase/ histidinol dehydrogenase; Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine. | 0.998 |
hisD | KPN32258.1 | SY89_02740 | SY89_03026 | Bifunctional histidinal dehydrogenase/ histidinol dehydrogenase; Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine. | Hypothetical protein. | 0.499 |
hisD | aspC_5 | SY89_02740 | SY89_02194 | Bifunctional histidinal dehydrogenase/ histidinol dehydrogenase; Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine. | Aspartate aminotransferase. | 0.998 |