STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDD70400.1Sarcosine oxidase subunit alpha/sarcosine oxidase subunit delta. (93 aa)    
Predicted Functional Partners:
SDD70442.1
Sarcosine oxidase subunit alpha; Belongs to the GcvT family.
 0.999
SDD70470.1
Sarcosine oxidase subunit gamma.
 
 0.999
SDD70368.1
Sarcosine oxidase subunit beta.
 0.998
SDD70496.1
Dimethylglycine dehydrogenase; Belongs to the GcvT family.
 
 0.998
SDD70560.1
Aminomethyltransferase; Belongs to the GcvT family.
 0.930
SDD61312.1
Sulfide dehydrogenase [flavocytochrome c] flavoprotein chain.
  
 0.915
SDD80314.1
Sulfide:quinone oxidoreductase.
  
 0.915
SDE71631.1
Glutamate synthase (NADPH/NADH) large chain.
    
  0.902
SDE10751.1
Aminomethyltransferase.
 
 0.894
glyA
Glycine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism.
  
 
  0.814
Your Current Organism:
Rhodospira trueperi
NCBI taxonomy Id: 69960
Other names: ATCC 700224, R. trueperi, strain 8316
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.