STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDD75823.13-hydroxyisobutyrate dehydrogenase. (301 aa)    
Predicted Functional Partners:
SDE05384.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
    
  0.819
SDE37306.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
    
  0.819
SDD75789.1
Hypothetical protein.
       0.773
SDD75717.1
enoyl-CoA hydratase.
 
 
 0.752
SDE08711.1
Hydroxypyruvate isomerase; Belongs to the hyi family.
 
 
 0.714
SDD75690.1
3-hydroxyisobutyrate dehydrogenase.
 
  
 
0.648
SDD75650.1
3-hydroxyisobutyrate dehydrogenase; Belongs to the HIBADH-related family.
 
  
 
0.589
SDD75895.1
fatty-acyl-CoA synthase.
  
    0.583
SDE68149.1
Acetyltransferase.
    
  0.583
SDD75855.1
Predicted arabinose efflux permease, MFS family.
       0.581
Your Current Organism:
Rhodospira trueperi
NCBI taxonomy Id: 69960
Other names: ATCC 700224, R. trueperi, strain 8316
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.