STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDD97442.1Collagenase-like protease, PrtC family. (307 aa)    
Predicted Functional Partners:
SDD97415.1
Putative protease.
 
 0.992
SDF03766.1
Uncharacterized protein involved in response to NO.
 
    0.689
SDE47829.1
Dimethylsulfide dehydrogenase subunit beta/complex iron-sulfur molybdoenzyme family reductase subunit beta.
 
    0.626
SDD76609.1
Predicted O-methyltransferase YrrM.
  
  
 0.624
SDD97389.1
Predicted lipid carrier protein YhbT, contains SCP2 domain.
  
  
 0.614
SDE68626.1
Anaerobic ribonucleoside-triphosphate reductase.
 
    0.459
SDD98331.1
Phosphoribulokinase.
  
    0.442
SDD97471.1
Carboxyl-terminal processing protease.
       0.441
SDF03858.1
NitT/TauT family transport system substrate-binding protein.
 
     0.432
SDD68172.1
4-hydroxy-3-polyprenylbenzoate decarboxylase; Belongs to the UbiD family.
 
    0.421
Your Current Organism:
Rhodospira trueperi
NCBI taxonomy Id: 69960
Other names: ATCC 700224, R. trueperi, strain 8316
Server load: low (16%) [HD]