STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDE05796.1Glycine betaine/proline transport system ATP-binding protein. (360 aa)    
Predicted Functional Partners:
SDE05822.1
Glycine betaine/proline transport system permease protein.
 0.999
SDE05858.1
Glycine betaine/proline transport system substrate-binding protein.
 
 0.998
SDE41630.1
Glycine betaine/proline transport system permease protein.
 0.997
SDE41599.1
Glycine betaine/proline transport system substrate-binding protein.
 
 0.995
SDF07003.1
Molybdate transport system permease protein; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.
 
      0.807
SDE70693.1
ABC-2 type transport system ATP-binding protein.
 
    
0.448
SDE46541.1
ABC-2 type transport system ATP-binding protein.
 
     
0.436
SDF06806.1
Sulfate transport system permease protein; Part of the ABC transporter complex (TC 3.A.1.6.1) involved in sulfate/thiosulfate import; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.
 
      0.425
SDE95574.1
ATP-binding cassette, subfamily B.
 
     
0.424
SDF06842.1
Sulfate transport system permease protein.
 
      0.414
Your Current Organism:
Rhodospira trueperi
NCBI taxonomy Id: 69960
Other names: ATCC 700224, R. trueperi, strain 8316
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.