Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SDE06539.1 | SDE06565.1 | SAMN05421720_10356 | SAMN05421720_10357 | Photosynthetic reaction center M subunit; The reaction center is a membrane-bound complex that mediates the initial photochemical event in the electron transfer process of photosynthesis. | Photosynthetic reaction center L subunit. | 0.998 |
| SDE06539.1 | SDE06642.1 | SAMN05421720_10356 | SAMN05421720_10360 | Photosynthetic reaction center M subunit; The reaction center is a membrane-bound complex that mediates the initial photochemical event in the electron transfer process of photosynthesis. | Chlorophyllide a reductase subunit Z. | 0.946 |
| SDE06539.1 | SDE06667.1 | SAMN05421720_10356 | SAMN05421720_10361 | Photosynthetic reaction center M subunit; The reaction center is a membrane-bound complex that mediates the initial photochemical event in the electron transfer process of photosynthesis. | Chlorophyllide a reductase subunit Y. | 0.857 |
| SDE06539.1 | SDE06679.1 | SAMN05421720_10356 | SAMN05421720_10362 | Photosynthetic reaction center M subunit; The reaction center is a membrane-bound complex that mediates the initial photochemical event in the electron transfer process of photosynthesis. | Chlorophyllide a reductase subunit X; Belongs to the NifH/BchL/ChlL family. | 0.948 |
| SDE06539.1 | SDE06705.1 | SAMN05421720_10356 | SAMN05421720_10363 | Photosynthetic reaction center M subunit; The reaction center is a membrane-bound complex that mediates the initial photochemical event in the electron transfer process of photosynthesis. | 3-hydroxyethyl bacteriochlorophyllide a dehydrogenase. | 0.853 |
| SDE06539.1 | SDE07115.1 | SAMN05421720_10356 | SAMN05421720_10379 | Photosynthetic reaction center M subunit; The reaction center is a membrane-bound complex that mediates the initial photochemical event in the electron transfer process of photosynthesis. | 3-vinyl bacteriochlorophyllide hydratase. | 0.834 |
| SDE06539.1 | SDE07192.1 | SAMN05421720_10356 | SAMN05421720_10382 | Photosynthetic reaction center M subunit; The reaction center is a membrane-bound complex that mediates the initial photochemical event in the electron transfer process of photosynthesis. | Chlorophyll synthase. | 0.796 |
| SDE06539.1 | bchB | SAMN05421720_10356 | SAMN05421720_10377 | Photosynthetic reaction center M subunit; The reaction center is a membrane-bound complex that mediates the initial photochemical event in the electron transfer process of photosynthesis. | Light-independent protochlorophyllide reductase subunit B; Component of the dark-operative protochlorophyllide reductase (DPOR) that uses Mg-ATP and reduced ferredoxin to reduce ring D of protochlorophyllide (Pchlide) to form chlorophyllide a (Chlide). This reaction is light-independent. The NB-protein (BchN-BchB) is the catalytic component of the complex. | 0.780 |
| SDE06539.1 | bchL | SAMN05421720_10356 | SAMN05421720_10375 | Photosynthetic reaction center M subunit; The reaction center is a membrane-bound complex that mediates the initial photochemical event in the electron transfer process of photosynthesis. | Light-independent protochlorophyllide reductase subunit L; Component of the dark-operative protochlorophyllide reductase (DPOR) that uses Mg-ATP and reduced ferredoxin to reduce ring D of protochlorophyllide (Pchlide) to form chlorophyllide a (Chlide). This reaction is light-independent. The L component serves as a unique electron donor to the NB-component of the complex, and binds Mg-ATP. | 0.914 |
| SDE06539.1 | bchN | SAMN05421720_10356 | SAMN05421720_10378 | Photosynthetic reaction center M subunit; The reaction center is a membrane-bound complex that mediates the initial photochemical event in the electron transfer process of photosynthesis. | Light-independent protochlorophyllide reductase subunit N; Component of the dark-operative protochlorophyllide reductase (DPOR) that uses Mg-ATP and reduced ferredoxin to reduce ring D of protochlorophyllide (Pchlide) to form chlorophyllide a (Chlide). This reaction is light-independent. The NB-protein (BchN-BchB) is the catalytic component of the complex. | 0.869 |
| SDE06565.1 | SDE06539.1 | SAMN05421720_10357 | SAMN05421720_10356 | Photosynthetic reaction center L subunit. | Photosynthetic reaction center M subunit; The reaction center is a membrane-bound complex that mediates the initial photochemical event in the electron transfer process of photosynthesis. | 0.998 |
| SDE06565.1 | SDE06642.1 | SAMN05421720_10357 | SAMN05421720_10360 | Photosynthetic reaction center L subunit. | Chlorophyllide a reductase subunit Z. | 0.966 |
| SDE06565.1 | SDE06667.1 | SAMN05421720_10357 | SAMN05421720_10361 | Photosynthetic reaction center L subunit. | Chlorophyllide a reductase subunit Y. | 0.862 |
| SDE06565.1 | SDE06679.1 | SAMN05421720_10357 | SAMN05421720_10362 | Photosynthetic reaction center L subunit. | Chlorophyllide a reductase subunit X; Belongs to the NifH/BchL/ChlL family. | 0.964 |
| SDE06565.1 | SDE06705.1 | SAMN05421720_10357 | SAMN05421720_10363 | Photosynthetic reaction center L subunit. | 3-hydroxyethyl bacteriochlorophyllide a dehydrogenase. | 0.843 |
| SDE06565.1 | SDE07115.1 | SAMN05421720_10357 | SAMN05421720_10379 | Photosynthetic reaction center L subunit. | 3-vinyl bacteriochlorophyllide hydratase. | 0.851 |
| SDE06565.1 | SDE07192.1 | SAMN05421720_10357 | SAMN05421720_10382 | Photosynthetic reaction center L subunit. | Chlorophyll synthase. | 0.812 |
| SDE06565.1 | bchB | SAMN05421720_10357 | SAMN05421720_10377 | Photosynthetic reaction center L subunit. | Light-independent protochlorophyllide reductase subunit B; Component of the dark-operative protochlorophyllide reductase (DPOR) that uses Mg-ATP and reduced ferredoxin to reduce ring D of protochlorophyllide (Pchlide) to form chlorophyllide a (Chlide). This reaction is light-independent. The NB-protein (BchN-BchB) is the catalytic component of the complex. | 0.780 |
| SDE06565.1 | bchL | SAMN05421720_10357 | SAMN05421720_10375 | Photosynthetic reaction center L subunit. | Light-independent protochlorophyllide reductase subunit L; Component of the dark-operative protochlorophyllide reductase (DPOR) that uses Mg-ATP and reduced ferredoxin to reduce ring D of protochlorophyllide (Pchlide) to form chlorophyllide a (Chlide). This reaction is light-independent. The L component serves as a unique electron donor to the NB-component of the complex, and binds Mg-ATP. | 0.923 |
| SDE06565.1 | bchN | SAMN05421720_10357 | SAMN05421720_10378 | Photosynthetic reaction center L subunit. | Light-independent protochlorophyllide reductase subunit N; Component of the dark-operative protochlorophyllide reductase (DPOR) that uses Mg-ATP and reduced ferredoxin to reduce ring D of protochlorophyllide (Pchlide) to form chlorophyllide a (Chlide). This reaction is light-independent. The NB-protein (BchN-BchB) is the catalytic component of the complex. | 0.877 |
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