STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDE15737.1Two-component system, OmpR family, response regulator. (225 aa)    
Predicted Functional Partners:
SDE47433.1
PAS domain S-box-containing protein.
  
0.986
SDE83149.1
PAS domain S-box-containing protein.
  
 0.986
SDE78802.1
Two-component system, OmpR family, response regulator QseB/two-component system, cell cycle response regulator CpdR.
 
0.983
SDE27668.1
His Kinase A (phospho-acceptor) domain-containing protein.
 
 0.979
SDD80004.1
PAS domain S-box-containing protein.
 
 0.974
SDD65353.1
PAS domain S-box-containing protein.
 
 0.972
SDE08372.1
Diguanylate cyclase (GGDEF) domain-containing protein.
  
 0.966
SDE15765.1
Signal transduction histidine kinase.
 0.966
SDE81010.1
Two-component system, chemotaxis family, CheB/CheR fusion protein.
  
 0.962
SDF02443.1
Two-component response regulator, FixJ family, consists of REC and HTH domains.
  
 0.960
Your Current Organism:
Rhodospira trueperi
NCBI taxonomy Id: 69960
Other names: ATCC 700224, R. trueperi, strain 8316
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.