STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDE16944.1Precorrin-2/cobalt-factor-2 C20-methyltransferase. (247 aa)    
Predicted Functional Partners:
SDD90778.1
Cobalt-precorrin 5A hydrolase / precorrin-3B C17-methyltransferase.
 
 0.999
SDE16971.1
Cobalt-precorrin 5A hydrolase / precorrin-3B C17-methyltransferase.
 
 0.999
SDE16909.1
precorrin-8X/cobalt-precorrin-8 methylmutase.
 
 0.996
SDE16885.1
precorrin-6Y C5,15-methyltransferase (decarboxylating).
 
 0.993
SDD90745.1
Precorrin-4/cobalt-precorrin-4 C11-methyltransferase.
 
 
 0.984
SDE17031.1
precorrin-6A/cobalt-precorrin-6A reductase.
 
 
 0.976
SDE28221.1
uroporphyrin-III C-methyltransferase; Belongs to the precorrin methyltransferase family.
 
 
 0.927
SDE37245.1
Sirohydrochlorin cobaltochelatase.
    
 0.879
cbiA
Cobyrinic acid a,c-diamide synthase; Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of cobyrinate, using either L-glutamine or ammonia as the nitrogen source; Belongs to the CobB/CbiA family.
 
  
 0.824
cobQ-2
Adenosylcobyric acid synthase; Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation. Belongs to the CobB/CobQ family. CobQ subfamily.
 
  
 0.816
Your Current Organism:
Rhodospira trueperi
NCBI taxonomy Id: 69960
Other names: ATCC 700224, R. trueperi, strain 8316
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