STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDE17090.1Tricarballylate dehydrogenase. (440 aa)    
Predicted Functional Partners:
SDE17063.1
Citrate/tricarballylate utilization protein.
 0.998
SDE30887.1
Succinate dehydrogenase / fumarate reductase cytochrome b subunit.
  
 0.997
SDE46616.1
Fumarate hydratase, class I; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family.
  
 
 0.988
SDD68381.1
Fumarate reductase iron-sulfur subunit.
  
 0.987
SDE30973.1
Succinate dehydrogenase / fumarate reductase iron-sulfur subunit; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family.
  
 0.987
SDE05384.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
  
 
 0.974
SDE37306.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
  
 
 0.974
SDE30917.1
Succinate dehydrogenase / fumarate reductase membrane anchor subunit.
  
 0.951
SDD68337.1
Fumarate reductase subunit C.
  
 0.944
SDE08891.1
Antitoxin CptB.
  
 0.941
Your Current Organism:
Rhodospira trueperi
NCBI taxonomy Id: 69960
Other names: ATCC 700224, R. trueperi, strain 8316
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