STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDE29118.1DNA-binding transcriptional regulator, MarR family. (151 aa)    
Predicted Functional Partners:
fliP
Flagellar biosynthetic protein FliP; Plays a role in the flagellum-specific transport system. Belongs to the FliP/MopC/SpaP family.
   
    0.775
SDE55432.1
HemY protein.
  
     0.655
SDD65643.1
DNA processing protein.
   
    0.619
SDE29087.1
DNA repair protein RadC; Belongs to the UPF0758 family.
  
    0.615
SDE26700.1
Tellurite resistance protein TerB.
  
     0.602
SDE81504.1
Invasion associated locus B (IalB) protein.
  
     0.577
SDE00204.1
Flagellin C-terminal helical region; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.
  
    0.571
SDE54714.1
Methyltransferase domain-containing protein.
  
     0.570
SDE82436.1
Hypothetical protein.
  
     0.560
flgH
Flagellar L-ring protein precursor FlgH; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.
  
    0.547
Your Current Organism:
Rhodospira trueperi
NCBI taxonomy Id: 69960
Other names: ATCC 700224, R. trueperi, strain 8316
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.