STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDE30369.13-hydroxybutyryl-CoA dehydratase. (142 aa)    
Predicted Functional Partners:
SDD76992.1
acetoacetyl-CoA reductase.
 
 
 0.874
SDD75717.1
enoyl-CoA hydratase.
  
 0.870
SDE91767.1
enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 0.870
SDD75107.1
crotonyl-CoA carboxylase/reductase.
  
 0.849
SDE82163.1
Enoyl-CoA hydratase/carnithine racemase.
  
 0.848
SDE05384.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
     
 0.824
SDE37306.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
     
 0.824
SDD69390.1
Polyhydroxyalkanoate synthase.
 
  
 0.811
SDE82884.1
Polyhydroxyalkanoate synthase.
 
  
 0.803
SDE20917.1
Biotin carboxyl carrier protein.
    
 0.796
Your Current Organism:
Rhodospira trueperi
NCBI taxonomy Id: 69960
Other names: ATCC 700224, R. trueperi, strain 8316
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