Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDE05384.1 | SDE25513.1 | SAMN05421720_10313 | SAMN05421720_1053 | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | Helix-turn-helix. | 0.496 |
SDE05384.1 | SDE37306.1 | SAMN05421720_10313 | SAMN05421720_10634 | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | 0.999 |
SDE05384.1 | SDE97456.1 | SAMN05421720_10313 | SAMN05421720_11922 | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | HEAT repeat-containing protein. | 0.810 |
SDE05384.1 | nadE | SAMN05421720_10313 | SAMN05421720_101567 | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | NAD+ synthase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source. | 0.891 |
SDE25513.1 | SDE05384.1 | SAMN05421720_1053 | SAMN05421720_10313 | Helix-turn-helix. | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | 0.496 |
SDE25513.1 | SDE25539.1 | SAMN05421720_1053 | SAMN05421720_1054 | Helix-turn-helix. | Hypothetical protein. | 0.509 |
SDE25513.1 | SDE25567.1 | SAMN05421720_1053 | SAMN05421720_1055 | Helix-turn-helix. | Hypothetical protein. | 0.509 |
SDE25513.1 | SDE37306.1 | SAMN05421720_1053 | SAMN05421720_10634 | Helix-turn-helix. | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | 0.496 |
SDE25513.1 | SDE97456.1 | SAMN05421720_1053 | SAMN05421720_11922 | Helix-turn-helix. | HEAT repeat-containing protein. | 0.452 |
SDE25513.1 | SDF01913.1 | SAMN05421720_1053 | SAMN05421720_12315 | Helix-turn-helix. | Serine/threonine-protein kinase HipA. | 0.485 |
SDE25513.1 | nadE | SAMN05421720_1053 | SAMN05421720_101567 | Helix-turn-helix. | NAD+ synthase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source. | 0.551 |
SDE25539.1 | SDE25513.1 | SAMN05421720_1054 | SAMN05421720_1053 | Hypothetical protein. | Helix-turn-helix. | 0.509 |
SDE25539.1 | SDE25567.1 | SAMN05421720_1054 | SAMN05421720_1055 | Hypothetical protein. | Hypothetical protein. | 0.773 |
SDE25567.1 | SDE25513.1 | SAMN05421720_1055 | SAMN05421720_1053 | Hypothetical protein. | Helix-turn-helix. | 0.509 |
SDE25567.1 | SDE25539.1 | SAMN05421720_1055 | SAMN05421720_1054 | Hypothetical protein. | Hypothetical protein. | 0.773 |
SDE37306.1 | SDE05384.1 | SAMN05421720_10634 | SAMN05421720_10313 | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | 0.999 |
SDE37306.1 | SDE25513.1 | SAMN05421720_10634 | SAMN05421720_1053 | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | Helix-turn-helix. | 0.496 |
SDE37306.1 | SDE97456.1 | SAMN05421720_10634 | SAMN05421720_11922 | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | HEAT repeat-containing protein. | 0.810 |
SDE37306.1 | nadE | SAMN05421720_10634 | SAMN05421720_101567 | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | NAD+ synthase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source. | 0.891 |
SDE97456.1 | SDE05384.1 | SAMN05421720_11922 | SAMN05421720_10313 | HEAT repeat-containing protein. | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | 0.810 |
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